BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E01SP1|AL426690
(761 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1679 825 0.0
>3x_Contig1679
Length = 11609
Score = 825 bits (414), Expect = 0.0
Identities = 448/460 (97%), Gaps = 1/460 (0%)
Strand = Plus / Minus
Query: 303 atatatatttatrcgagtataaggrtgatagagcttaa-tacttgtcaaaaggrgaagtt 361
|||||||||||| |||||||||| | ||| | ||||| |||||||||||||| ||||||
Sbjct: 11605 atatatatttatacgagtataagcatcatacaccttaaatacttgtcaaaaggagaagtt 11546
Query: 362 aatacaatacaatacaatacaatagggcttagaaaatgcaaccctatgagaacaggtgcc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11545 aatacaatacaatacaatacaatagggcttagaaaatgcaaccctatgagaacaggtcca 11486
Query: 422 atttagtttgaatatgggttattactgccttgtgatggaggcataaactgggagasacct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11485 atttagtttgaatatgggttattactgccttgtgatggaggcataaactgggagaaacct 11426
Query: 482 ccatttgctggagattttggtgcattgaattgtgcgttcagggcctgccttgagttttca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11425 ccatttgctggagattttggtgcattgaattgtgcgttcagggcctgccttgagttttca 11366
Query: 542 tggggagcagaatatttctgcgaatattgctgaggaggatattgttgaggtggatactgc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11365 tggggagcagaatatttctgcgaatattgctgaggaggatattgttgaggtggatactgc 11306
Query: 602 tgaggaagatattgttggtactgttgaccaggtggatgctgctgctggttaggactatgt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11305 tgaggaagatattgttggtactgttgaccaggtggatgctgctgctggttaggactatgt 11246
Query: 662 ggaaactgctggttgggcattggtctgccaggatttccgtatggattatgcgtacccatt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11245 ggaaactgctggttgggcattggtctgccaggatttccgtatggattatgcgtacccatt 11186
Query: 722 tgctgtccctgattttgatgtctgttctgttgaggagaga 761
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 11185 tgctgtccctgattttgatgtctgtactgttgaggagaga 11146
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5340
Number of Sequences: 1807
Number of extensions: 5340
Number of successful extensions: 129
Number of sequences better than 1.0e-20: 1
length of query: 761
length of database: 10,358,551
effective HSP length: 16
effective length of query: 745
effective length of database: 10,329,639
effective search space: 7695581055
effective search space used: 7695581055
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)